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  5. Len_g03813

Len_g03813


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03813

Target Alias Description ECC score Gene Family Method Actions
Adi_g054785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G042300.1 Ceric.04G042300 not classified & original description: pacid=50630995... 0.07 OrthoFinder output from all 47 species
Ceric.12G066500.1 Ceric.12G066500 not classified & original description: pacid=50602160... 0.03 OrthoFinder output from all 47 species
Ceric.24G054300.1 Ceric.24G054300 not classified & original description: pacid=50629415... 0.05 OrthoFinder output from all 47 species
Ceric.35G060600.1 Ceric.35G060600 not classified & original description: pacid=50581737... 0.07 OrthoFinder output from all 47 species
Dac_g33428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29428 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32677 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_35079 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os08g23120.1 LOC_Os08g23120 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g02263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_125759g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_141102g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_79622g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g12149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014264 No alias not classified & original description: CDS=1-1203 0.03 OrthoFinder output from all 47 species
Sam_g11715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g045240.3.1 Solyc07g045240 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g11285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002844_P001 Zm00001e002844 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 75
IPR000504 RRM_dom 103 161
No external refs found!