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  5. Len_g03832

Len_g03832


Description : subgroup ERF-I transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03832
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00148470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.02 OrthoFinder output from all 47 species
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g00499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02279 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10058 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01030 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g01204 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07222 No alias subgroup ERF-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g22445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g69291 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Ceric.10G055400.1 Ceric.10G055400 not classified & original description: pacid=50611842... 0.04 OrthoFinder output from all 47 species
Ceric.1Z027000.1 ERF110, Ceric.1Z027000 not classified & original description: pacid=50632868... 0.03 OrthoFinder output from all 47 species
Ceric.25G020600.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g07566 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23015 ERF38, ATERF38 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23248 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03858 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16100 No alias subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19848 RAP2.6 subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39891 No alias subgroup ERF-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00294 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g00819 ERF1, ATERF1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14006 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21774 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Gb_00745 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_41294 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g13710.1 TINY2, LOC_Os02g13710 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g38750.1 RAP2.11, LOC_Os07g38750 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Lfl_g03081 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03205 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_66442g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_9160409g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g07037 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g08368 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09426 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g18978 No alias subgroup ERF-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29252 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43138 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07909 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g10934 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g15421 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g17891 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11378 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g26637 tny not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004888 No alias not classified & original description: CDS=1-1152 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012659 No alias not classified & original description: CDS=1-1455 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026324 ERF110 not classified & original description: CDS=572-2401 0.03 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g093560.1.1 Solyc03g093560 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g095977.1.1 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g117130.3.1 Solyc03g117130 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g009110.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc11g042560.1.1 Solyc11g042560 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Tin_g06979 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12812 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004208_P001 Zm00001e004208 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e007352_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023078_P001 Zm00001e023078 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e025840_P001 DREB2A, DREB2,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e026989_P001 ERF110, Zm00001e026989 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 272 320
No external refs found!