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  5. Len_g03904

Len_g03904


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: none


Gene families : OG0001085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03904
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00183470 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00217p00029330 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G13370 No alias Plant protein of unknown function (DUF936) 0.07 OrthoFinder output from all 47 species
Ala_g32630 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Aop_g11292 No alias regulatory protein *(CORD) of cortical microtubule... 0.12 OrthoFinder output from all 47 species
Aspi01Gene00569.t1 Aspi01Gene00569 regulatory protein *(CORD) of cortical microtubule... 0.1 OrthoFinder output from all 47 species
Ceric.02G008100.1 Ceric.02G008100 regulatory protein *(CORD) of cortical microtubule... 0.1 OrthoFinder output from all 47 species
Ceric.11G037300.1 Ceric.11G037300 regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
GSVIVT01005996001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01015437001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_38624 No alias regulatory protein (CORD) of cortical microtubule organisation 0.08 OrthoFinder output from all 47 species
LOC_Os11g02740.1 LOC_Os11g02740 regulatory protein (CORD) of cortical microtubule organisation 0.07 OrthoFinder output from all 47 species
LOC_Os12g02710.1 LOC_Os12g02710 regulatory protein (CORD) of cortical microtubule organisation 0.09 OrthoFinder output from all 47 species
Lfl_g39733 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
MA_39811g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.02 OrthoFinder output from all 47 species
MA_8827g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.05 OrthoFinder output from all 47 species
Msp_g14571 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Msp_g15670 No alias regulatory protein *(CORD) of cortical microtubule... 0.14 OrthoFinder output from all 47 species
Nbi_g10387 No alias regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
Nbi_g25831 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Ppi_g12415 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Ppi_g46361 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020683 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Solyc12g007020.2.1 Solyc12g007020 regulatory protein (CORD) of cortical microtubule organisation 0.06 OrthoFinder output from all 47 species
Spa_g44766 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g47771 No alias regulatory protein *(CORD) of cortical microtubule... 0.1 OrthoFinder output from all 47 species
Tin_g08819 No alias regulatory protein *(CORD) of cortical microtubule... 0.07 OrthoFinder output from all 47 species
Tin_g44365 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species
Zm00001e024007_P001 Zm00001e024007 regulatory protein (CORD) of cortical microtubule organisation 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 926
No external refs found!