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  5. Len_g04060

Len_g04060


Description : component *(uL29c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0004758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004758_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00170150 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Aev_g03513 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g00554 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aob_g00731 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre06.g259850 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g03965 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g13501 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g16498 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10268152g0010 No alias component psRPL29 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
MA_42151g0010 No alias component psRPL29 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Mp4g10390.1 No alias component psRPL29 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Pp3c9_19800V3.1 Pp3c9_19800 Ribosomal L29 family protein 0.01 OrthoFinder output from all 47 species
Sam_g12929 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Smo85675 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Spa_g03535 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Spa_g13994 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 61 116
No external refs found!