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  5. Len_g04246

Len_g04246


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04246
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Ala_g05216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10387 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16441 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37336 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38925 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05366.t1 VAC1, ECB2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14821.t1 CRR2, Aspi01Gene14821 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20543.t1 EMB2758, Aspi01Gene20543 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30532.t1 Aspi01Gene30532 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61596.t2 CRR22, Aspi01Gene61596 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G002600.1 EMB2758, Ceric.02G002600 not classified & original description: pacid=50585462... 0.04 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.04 OrthoFinder output from all 47 species
Ceric.20G003600.1 Ceric.20G003600 not classified & original description: pacid=50567008... 0.04 OrthoFinder output from all 47 species
Ceric.37G053600.1 Ceric.37G053600 not classified & original description: pacid=50616731... 0.05 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05750 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07038 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10277392g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_131437g0010 No alias RNA editing factor (MEF3) 0.03 OrthoFinder output from all 47 species
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_25515g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_38687g0010 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species
MA_39263g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_470679g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.06 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
MA_62181g0010 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_71420g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_904305g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_957690g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo132724 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032679_P001 Zm00001e032679 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 225
IPR046848 E_motif 242 301
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 21 68
IPR032867 DYW_dom 369 446
No external refs found!