1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g04626

Len_g04626


Description : not classified & original description: none


Gene families : OG0000187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04626
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Ala_g22838 XXT2, XT2, ATXT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03160 No alias 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05359 XT1, XXT1, ATXT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21508 XT1, XXT1, ATXT1 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39729 XXT2, XT2, ATXT2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g23581 XXT5 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0355.g066701 XXT2, XT2, ATXT2 not classified & original description: CDS=1-921 0.03 OrthoFinder output from all 47 species
Cba_g05630 XXT2, XT2, ATXT2 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g63352 XXT2, XT2, ATXT2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g08531 XXT2, XT2, ATXT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13849 XT1, XXT1, ATXT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01400 XT1, XXT1, ATXT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09703 XXT5 UDP-xylose-dependent 1,6-alpha-xylosyltransferase 0.02 OrthoFinder output from all 47 species
Lfl_g14226 XXT2, XT2, ATXT2 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g18730.1 XT1, XXT1, ATXT1 Xyloglucan 6-xylosyltransferase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g17875 No alias galactoglucomannan galactosyltransferase *(MUCI10) &... 0.03 OrthoFinder output from all 47 species
Ppi_g01096 XXT2, XT2, ATXT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02032 No alias galactoglucomannan galactosyltransferase *(MUCI10) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020913 XT1, XXT1, ATXT1 1,6-alpha-xylosyltransferase *(XXT) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023995 XXT2, XT2, ATXT2 not classified & original description: CDS=1-630 0.03 OrthoFinder output from all 47 species
Smo131183 XT1, XXT1, ATXT1 Cell... 0.03 OrthoFinder output from all 47 species
Solyc02g092210.1.1 Solyc02g092210 galactoglucomannan galactosyltransferase (MUCI10) 0.02 OrthoFinder output from all 47 species
Spa_g39571 XXT2, XT2, ATXT2 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08579 XT1, XXT1, ATXT1 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024189_P001 Zm00001e024189 galactoglucomannan galactosyltransferase (MUCI10) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008630 Glyco_trans_34 60 203
No external refs found!