Len_g04787


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04787

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266930 OTP81 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00228270 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G50270 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023764 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10827 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18741 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04456 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02316.t1 Aspi01Gene02316 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06807.t1 Aspi01Gene06807 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06826.t1 CRR2, Aspi01Gene06826 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10264.t1 Aspi01Gene10264 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20358.t1 Aspi01Gene20358 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67320.t1 EMB2758, Aspi01Gene67320 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72589.t1 MEF22, Aspi01Gene72589 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010669 No alias not classified & original description: CDS=1-3072 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030532 No alias not classified & original description: CDS=1-2100 0.03 OrthoFinder output from all 47 species
Azfi_s0164.g054263 No alias not classified & original description: CDS=137-2560 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065835 No alias not classified & original description: CDS=1-1926 0.03 OrthoFinder output from all 47 species
Cba_g05714 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g39058 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.03 OrthoFinder output from all 47 species
Ceric.04G040300.1 CRR22, Ceric.04G040300 not classified & original description: pacid=50630674... 0.03 OrthoFinder output from all 47 species
Ceric.10G047400.1 OTP84, Ceric.10G047400 not classified & original description: pacid=50612794... 0.03 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.03 OrthoFinder output from all 47 species
Ceric.21G051400.1 VAC1, ECB2,... not classified & original description: pacid=50603510... 0.03 OrthoFinder output from all 47 species
Ceric.28G059600.1 OTP84, Ceric.28G059600 not classified & original description: pacid=50569965... 0.03 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07224 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33495 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17745 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23170 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24078 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34533 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27843 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29968 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22233 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003527 EMB2758 not classified & original description: CDS=1-1284 0.04 OrthoFinder output from all 47 species
Sam_g02108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g051780.3.1 Solyc03g051780 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.02 OrthoFinder output from all 47 species
Solyc07g005170.3.1 Solyc07g005170 Pentatricopeptide repeat-containing protein At1g09410,... 0.02 OrthoFinder output from all 47 species
Tin_g05561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08535 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13288 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 530 560
IPR002885 Pentatricopeptide_repeat 119 166
IPR002885 Pentatricopeptide_repeat 426 473
IPR002885 Pentatricopeptide_repeat 221 269
IPR002885 Pentatricopeptide_repeat 323 371
No external refs found!