Len_g05381


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05381

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00204910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g19191,... 0.05 OrthoFinder output from all 47 species
AMTR_s00061p00127300 MEF22,... Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Adi_g003717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20647 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07635 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03365 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16425 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036757001 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Len_g09782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17372 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18921 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19020 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g23208 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54496 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g59422 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32530 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g46657 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g24503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.03 OrthoFinder output from all 47 species
Spa_g15123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21797 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 184 231
IPR002885 Pentatricopeptide_repeat 83 130
IPR002885 Pentatricopeptide_repeat 389 435
IPR002885 Pentatricopeptide_repeat 286 333
IPR002885 Pentatricopeptide_repeat 363 388
IPR002885 Pentatricopeptide_repeat 58 81
IPR002885 Pentatricopeptide_repeat 159 182
No external refs found!