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  5. Len_g05404

Len_g05404 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05404

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Als_g39651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0020.g015535 OTP86 not classified & original description: CDS=1-2652 0.06 OrthoFinder output from all 47 species
Cba_g07680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g42846 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g30334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_14659g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g04292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19088 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18826 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 226 253
IPR002885 Pentatricopeptide_repeat 197 225
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 325 371
IPR002885 Pentatricopeptide_repeat 392 423
IPR046848 E_motif 445 504
IPR032867 DYW_dom 540 632
No external refs found!