Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G18520 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04417 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g18332 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g30519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04175 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28650 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000688 | No alias | not classified & original description: CDS=1-3246 | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g14997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29871 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g30012 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67785 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.18G077400.1 | Ceric.18G077400 | not classified & original description: pacid=50622022... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G035600.1 | Ceric.35G035600 | not classified & original description: pacid=50580802... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16108 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g25879 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g21842 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g64370.1 | LOC_Os03g64370 | Pentatricopeptide repeat-containing protein At5g52850,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17928 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g07796 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g03915 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g12042 | OTP84 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g17708 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g31739 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g25468 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g21891 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g24441 | REME1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g13245 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g64818 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g04531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04532 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04545 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g16118 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g22807 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23618 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30107 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g30593 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13846 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32088 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo76236 | No alias | Pentatricopeptide repeat-containing protein ELI1,... | 0.04 | OrthoFinder output from all 47 species | |
| Smo82255 | CRR2 | Pentatricopeptide repeat-containing protein At4g33990... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g16954 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20127 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g27280 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g30037 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 124 | 170 |
| IPR002885 | Pentatricopeptide_repeat | 328 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 69 |
| IPR002885 | Pentatricopeptide_repeat | 98 | 118 |
| IPR002885 | Pentatricopeptide_repeat | 302 | 322 |
| IPR002885 | Pentatricopeptide_repeat | 402 | 425 |
| No external refs found! |
