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  5. Len_g06238

Len_g06238 (PIP3B, PIP2;8)


Aliases : PIP3B, PIP2;8

Description : plasma membrane intrinsic protein *(PIP) & original description: none


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g06238
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00061000 GAMMA-TIP,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00151600 DELTA-TIP2,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.03 OrthoFinder output from all 47 species
AT2G25810 TIP4;1 tonoplast intrinsic protein 4;1 0.04 OrthoFinder output from all 47 species
AT4G35100 PIP3, SIMIP,... plasma membrane intrinsic protein 3 0.02 OrthoFinder output from all 47 species
Adi_g086682 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Aev_g00482 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06973 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016276001 PIP2D, PIP2;5 Solute transport.channels.MIP family.plasma membrane... 0.04 OrthoFinder output from all 47 species
GSVIVT01018189001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.03 OrthoFinder output from all 47 species
GSVIVT01018678001 TIP5;1 Solute transport.channels.MIP family.tonoplast intrinsic... 0.03 OrthoFinder output from all 47 species
GSVIVT01025188001 PIP2B, PIP2;2 Solute transport.channels.MIP family.plasma membrane... 0.04 OrthoFinder output from all 47 species
GSVIVT01025681001 PIP2D, PIP2;5 Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01026942001 PIP1C, TMP-B, PIP1;3 Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
LOC_Os03g64330.1 PIP2D, PIP2;5,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g16450.1 PIP3B, PIP2;8,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
Len_g03666 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
MA_40964g0010 GAMMA-TIP,... Probable aquaporin TIP1-1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_41167g0020 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
MA_6749557g0010 ATTIP2;1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g10059 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15822 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51824 ALPHA-TIP, TIP3;1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g096290.3.1 TMP-C, PIP1;4,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Zm00001e007564_P001 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Zm00001e009547_P001 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Zm00001e015168_P001 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Zm00001e023039_P001 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Zm00001e033413_P001 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Zm00001e039086_P002 ALPHA-TIP,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 36 264
No external refs found!