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  5. Len_g06242

Len_g06242


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g06242

Target Alias Description ECC score Gene Family Method Actions
Adi_g014576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G006800.1 Ceric.19G006800 not classified & original description: pacid=50575954... 0.04 OrthoFinder output from all 47 species
Ceric.23G036900.1 Ceric.23G036900 not classified & original description: pacid=50610458... 0.04 OrthoFinder output from all 47 species
Cre07.g352650 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01025256001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_10600g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g08570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g20794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05527 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g18433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 181 248
IPR000504 RRM_dom 56 120
No external refs found!