Len_g07262


Description : not classified & original description: none


Gene families : OG0008222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008222_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07262

Target Alias Description ECC score Gene Family Method Actions
Adi_g002273 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g31294 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g32224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11861 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0008.g011475 No alias not classified & original description: CDS=1-573 0.06 OrthoFinder output from all 47 species
Ceric.34G020300.1 Ceric.34G020300 not classified & original description: pacid=50622640... 0.1 OrthoFinder output from all 47 species
Ehy_g06465 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01038189001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os09g34140.2 LOC_Os09g34140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g02582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434413g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g08977 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06460 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g05578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g019550.2.1 Solyc12g019550 no hits & (original description: none) 0.18 OrthoFinder output from all 47 species
Spa_g09773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17065 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e034712_P001 Zm00001e034712 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!