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  5. Len_g07438

Len_g07438


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07438

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00250920 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00060560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00061170 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G39210 No alias Major facilitator superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g026166 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060196 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15000 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36894 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47686 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25350 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27134 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09166 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13602 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09437 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33366 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16288.t1 Aspi01Gene16288 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026631 No alias UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0142.g051380 No alias UMF23-type solute transporter & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Ceric.02G058700.1 Ceric.02G058700 UMF23-type solute transporter & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.31G002500.1 Ceric.31G002500 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G002600.1 Ceric.31G002600 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G002700.1 Ceric.31G002700 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g37326 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03924 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01425 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016196001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01017494001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024607001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os04g42420.1 LOC_Os04g42420 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os08g42010.1 LOC_Os08g42010 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
LOC_Os12g44180.1 LOC_Os12g44180 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Len_g41230 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_18517g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_2615g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_387320g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Msp_g26675 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31089 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17226 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11941 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53956 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62356 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001188 No alias UMF23-type solute transporter & original description: CDS=1-4125 0.03 OrthoFinder output from all 47 species
Sam_g19594 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo166510 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo62386 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo89661 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g109760.3.1 Solyc01g109760 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Spa_g11114 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01928 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19338 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32042 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006027_P001 Zm00001e006027 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 24 272
No external refs found!