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  5. Len_g08110

Len_g08110


Description : not classified & original description: none


Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08110
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00029p00022710 evm_27.TU.AmTr_v1... GEM-like protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 OrthoFinder output from all 47 species
AT5G13200 No alias GRAM domain family protein 0.04 OrthoFinder output from all 47 species
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 OrthoFinder output from all 47 species
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 OrthoFinder output from all 47 species
Adi_g116980 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07006 GEM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11767 GEM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08487 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36046 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60753.t1 FIP1, Aspi01Gene60753 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g035086 FIP1 not classified & original description: CDS=109-939 0.03 OrthoFinder output from all 47 species
Ceric.38G053800.1 FIP1, Ceric.38G053800 not classified & original description: pacid=50580215... 0.03 OrthoFinder output from all 47 species
Dac_g11079 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01010252001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019136001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42430.1 LOC_Os02g42430 GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g42440.1 LOC_Os02g42440 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g08860.1 FIP1, LOC_Os03g08860 GEM-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g52670.1 FIP1, LOC_Os03g52670 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os04g44510.1 LOC_Os04g44510 GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29400.1 LOC_Os12g29400 GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g24833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_958345g0030 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g05605 FIP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07508 FIP1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g00416 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005182 FIP1 not classified & original description: CDS=235-1194 0.03 OrthoFinder output from all 47 species
Smo85701 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g098660.3.1 Solyc03g098660 GEM-like protein 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g008940.4.1 Solyc04g008940 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc04g008950.4.1 Solyc04g008950 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc08g078510.3.1 Solyc08g078510 GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g011580.2.1 Solyc11g011580 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g05448 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05449 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20230 FIP1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e023068_P001 Zm00001e023068 GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039556_P001 Zm00001e039556 GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041280_P002 Zm00001e041280 GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041281_P001 Zm00001e041281 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 179 325
No external refs found!