Aliases : PNH, AGO10, ZLL
Description : not classified & original description: none
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00203090 | AGO4, OCP11,... | Chromatin organisation.DNA methylation.canonical... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00040p00171480 | AGO7, ZIP,... | Protein argonaute 7 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00069070 | AGO7, ZIP,... | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00169p00063850 | AGO1,... | Chromatin organisation.DNA methylation.canonical... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G48410 | AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.04 | OrthoFinder output from all 47 species | |
| AT5G21030 | No alias | PAZ domain-containing protein / piwi domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017777 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g34221 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04459 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11029 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16425 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07096 | AGO9 | siRNA-integrating factor *(AGO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g18181 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037488001 | AGO4, OCP11 | Chromatin organisation.DNA methylation.canonical... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g58600.1 | AGO5, LOC_Os03g58600 | Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g09020.1 | AGO5, LOC_Os07g09020 | Protein argonaute 14 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g21068 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g52026 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08413 | No alias | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10517 | No alias | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g008960.3.1 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g096750.1.1 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g098280.4.1 | AGO1, Solyc03g098280 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g38063 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51306 | AGO1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012276_P001 | AGO1, Zm00001e012276 | Protein argonaute 12 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e017367_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| No external refs found! |
