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  5. Len_g08332

Len_g08332 (ATXIK, XI-17, XIK)


Aliases : ATXIK, XI-17, XIK

Description : class XI myosin microfilament-based motor protein & original description: none


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08332

Target Alias Description ECC score Gene Family Method Actions
AT1G04600 XIA, ATXIA myosin XI A 0.02 OrthoFinder output from all 47 species
AT5G20470 No alias myosin, putative 0.02 OrthoFinder output from all 47 species
Adi_g104759 ATM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G063900.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Dac_g12479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03503 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Ehy_g04053 ATMYOS1, ATM4, ATM2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006004001 XIF, ATMYO5, ATXIF Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
GSVIVT01034427001 ATVIIIA, VIIIA Cytoskeleton.microfilament network.myosin... 0.02 OrthoFinder output from all 47 species
MA_10435698g0010 XIF, ATMYO5, ATXIF Myosin-12 OS=Arabidopsis thaliana (sp|f4iru3|myo12_arath : 312.0) 0.02 OrthoFinder output from all 47 species
Ore_g35776 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13599 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Sam_g11849 No alias class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Sam_g25578 No alias class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Solyc10g006820.4.1 ATMYOS1, ATM4,... class VIII myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Tin_g07679 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Zm00001e006446_P002 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Zm00001e012626_P001 ATVIIIA, VIIIA,... class VIII myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 316 335
IPR000048 IQ_motif_EF-hand-BS 245 264
IPR000048 IQ_motif_EF-hand-BS 268 286
IPR000048 IQ_motif_EF-hand-BS 340 360
IPR000048 IQ_motif_EF-hand-BS 293 312
IPR000048 IQ_motif_EF-hand-BS 363 383
IPR002710 Dilute_dom 869 972
IPR001609 Myosin_head_motor_dom 1 228
No external refs found!