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  5. Len_g08500

Len_g08500


Description : not classified & original description: none


Gene families : OG0000006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08500

Target Alias Description ECC score Gene Family Method Actions
Als_g14571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 1 101
No external refs found!