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  5. Len_g08508

Len_g08508 (JAZ12, TIFY3B)


Aliases : JAZ12, TIFY3B

Description : TIFY-type transcription factor & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08508
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Adi_g051075 JAZ4, TIFY6A not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g08320.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os09g26780.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os10g25290.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_10436587g0020 JAZ4, TIFY6A transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_10539g0010 JAZ9, TIFY7 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_14247g0030 JAZ12, TIFY3B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Solyc03g122190.3.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Solyc12g009220.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species
Zm00001e000589_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Zm00001e000590_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 26 57
IPR018467 CCT_CS 149 168
No external refs found!