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  5. Len_g08809

Len_g08809 (SnRK3.23, CIPK23,...)


Aliases : SnRK3.23, CIPK23, ATCIPK23, LKS1

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08809

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00244280 SnRK3.12, PKS6,... Protein modification.phosphorylation.CAMK kinase... 0.02 OrthoFinder output from all 47 species
Adi_g079515 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ala_g13751 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Als_g14261 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aop_g61231 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0222.g058772 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cba_g16394 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g07587 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os02g08140.1 CIPK21, SnRK3.4,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
LOC_Os03g17980.1 KIN10, SNRK1.1,... catalytic subunit alpha of SNF1-related SnRK1 protein... 0.04 OrthoFinder output from all 47 species
LOC_Os05g43840.1 WL4, SnRK3.9,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
LOC_Os08g34240.1 CIPK6, SIP3,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37800.1 KIN10, SNRK1.1,... catalytic subunit alpha of SNF1-related SnRK1 protein... 0.04 OrthoFinder output from all 47 species
LOC_Os12g03810.2 CIPK3, SnRK3.17,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Len_g05307 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
MA_10430528g0010 PKS18, CIPK20, SnRK3.6 SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Nbi_g01992 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Solyc03g005330.1.1 ATSRPK1,... CBL-interacting serine/threonine-protein kinase 7... 0.03 OrthoFinder output from all 47 species
Solyc09g083090.4.1 ATSRPK1,... CBL-interacting serine/threonine-protein kinase 7... 0.02 OrthoFinder output from all 47 species
Solyc12g010130.1.1 CIPK6, SIP3,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Tin_g12028 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e000192_P003 SnRK3.12, PKS6,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Zm00001e001502_P003 Zm00001e001502 SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Zm00001e009309_P003 KIN10, SNRK1.1,... catalytic subunit alpha of SNF1-related SnRK1 protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 16 271
IPR004041 NAF_dom 314 373
No external refs found!