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  5. Len_g09316

Len_g09316 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09316

Target Alias Description ECC score Gene Family Method Actions
Aev_g02437 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01003977001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
MA_137427g0010 ZFN1 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_22572g0020 ZFN1 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e017267_P001 Zm00001e017267 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 93 118
IPR000571 Znf_CCCH 349 373
IPR000571 Znf_CCCH 186 210
IPR000571 Znf_CCCH 140 164
IPR000571 Znf_CCCH 395 419
No external refs found!