Len_g09835

Description : component *(bL35c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g09835
Cluster	HCCA: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00070230	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.05	OrthoFinder output from all 47 species
AT2G24090	No alias	Ribosomal protein L35	0.05	OrthoFinder output from all 47 species
Als_g18654	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aop_g18112	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Cba_g00423	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cre04.g217932	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Dcu_g43056	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Ehy_g03085	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01012574001	No alias	Protein biosynthesis.organelle translation...	0.05	OrthoFinder output from all 47 species
LOC_Os06g43900.1	LOC_Os06g43900	component psRPL35 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Len_g34881	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Mp5g05850.1	No alias	component psRPL35 of large ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
Msp_g20481	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Pp3c22_13420V3.1	Pp3c22_13420	Ribosomal protein L35	0.03	OrthoFinder output from all 47 species
Ppi_g18684	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Smo444022	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Solyc07g006000.3.1	Solyc07g006000	component psRPL35 of large ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
Spa_g24771	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Zm00001e037448_P001	Zm00001e037448	component psRPL35 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021137	Ribosomal_L35	102	160

External Links

No external refs found!

Len_g09835

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation