1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g10003

Len_g10003


Description : manganese/calcium cation transporter *(BICAT) & original description: none


Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10003
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G64150 No alias Uncharacterized protein family (UPF0016) 0.07 OrthoFinder output from all 47 species
AT4G13590 No alias Uncharacterized protein family (UPF0016) 0.03 OrthoFinder output from all 47 species
Adi_g049937 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Aev_g07045 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Aob_g01813 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Aob_g39299 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Cba_g17433 No alias manganese/calcium cation transporter *(BICAT) & original... 0.06 OrthoFinder output from all 47 species
Cre16.g660000 No alias Solute transport.carrier-mediated transport.PAM71... 0.01 OrthoFinder output from all 47 species
Dac_g31401 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11604 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02423 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g16550 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019449001 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
GSVIVT01029035001 No alias Solute transport.carrier-mediated transport.PAM71... 0.04 OrthoFinder output from all 47 species
Gb_24383 No alias manganese/calcium cation transporter (BICAT) 0.05 OrthoFinder output from all 47 species
LOC_Os01g12220.1 LOC_Os01g12220 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
LOC_Os11g34180.1 LOC_Os11g34180 manganese/calcium cation transporter (BICAT) 0.04 OrthoFinder output from all 47 species
Lfl_g01398 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
MA_9249169g0010 No alias manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species
Msp_g11243 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00803 No alias manganese/calcium cation transporter *(BICAT) & original... 0.06 OrthoFinder output from all 47 species
Ore_g06932 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Ore_g15318 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Pir_g05443 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Pir_g10173 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000946 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Sam_g13196 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Sam_g15730 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Solyc08g081770.3.1 Solyc08g081770 manganese/calcium cation transporter (BICAT) 0.06 OrthoFinder output from all 47 species
Solyc09g091240.4.1 Solyc09g091240 manganese/calcium cation transporter (BICAT) 0.04 OrthoFinder output from all 47 species
Spa_g09226 No alias manganese/calcium cation transporter *(BICAT) & original... 0.08 OrthoFinder output from all 47 species
Tin_g44935 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e008707_P003 Zm00001e008707 manganese/calcium cation transporter (BICAT) 0.05 OrthoFinder output from all 47 species
Zm00001e026075_P001 Zm00001e026075 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001727 Gdt1 173 256
IPR001727 Gdt1 299 373
No external refs found!