Aliases : ARF10
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00182820 | ARF16,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G60450 | ARF4 | auxin response factor 4 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054964 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084657 | ARF19, IAA22, ARF11 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g103241 | TIR5, MSG1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02130 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g22075 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G070000.1 | ARF6, Ceric.29G070000 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G022300.1 | ARF6, Ceric.30G022300 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G056500.1 | ARF16, Ceric.32G056500 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17078 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09257 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g12286 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18587 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g41800.1 | ARF16, LOC_Os02g41800 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432580g0010 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03505 | ARF10 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g30468 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g41869 | ARF17 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g50454 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g04517 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g08938 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15530 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019239 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: CDS=1-3375 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0204.g025692 | ARF10 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g077560.3.1 | ARF3, ETT, Solyc02g077560 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g047460.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003229_P002 | ARF6, Zm00001e003229 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006640_P002 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020205_P004 | ARF3, ETT, Zm00001e020205 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
