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  5. Len_g10094

Len_g10094


Description : not classified & original description: none


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10094
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00042010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00175070 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G18290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT3G50800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Aev_g11436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g41190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01054.t1 Aspi01Gene01054 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34873.t1 Aspi01Gene34873 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36874.t1 Aspi01Gene36874 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36924.t1 Aspi01Gene36924 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g59869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G097000.1 Ceric.14G097000 not classified & original description: pacid=50633954... 0.03 OrthoFinder output from all 47 species
Ceric.1Z035600.1 Ceric.1Z035600 not classified & original description: pacid=50602495... 0.03 OrthoFinder output from all 47 species
Ceric.24G013000.1 Ceric.24G013000 not classified & original description: pacid=50629345... 0.05 OrthoFinder output from all 47 species
Ceric.26G065000.1 Ceric.26G065000 not classified & original description: pacid=50598973... 0.04 OrthoFinder output from all 47 species
Dcu_g16355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013456001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_05766 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35304 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35305 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g19880.1 LOC_Os01g19880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g09980.1 LOC_Os02g09980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g09990.1 LOC_Os02g09990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g19260.1 LOC_Os03g19260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g52940.1 LOC_Os03g52940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g47960.1 LOC_Os05g47960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g14770.1 LOC_Os06g14770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32000.1 LOC_Os09g32000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10427270g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_120551g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_152921g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_21964g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_31046g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_495117g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g03220.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g21042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089990.1.1 Solyc02g089990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g091180.1.1 Solyc02g091180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g007580.1.1 Solyc04g007580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18211 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034558_P001 Zm00001e034558 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038350_P001 Zm00001e038350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 220
No external refs found!