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  5. Len_g10354

Len_g10354 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10354
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 AFB2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Adi_g018200 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aev_g04138 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Als_g18642 TIR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13871.t1 COI1, Aspi01Gene13871 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene60504.t1 TIR1, Aspi01Gene60504 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.11G069600.1 COI1, Ceric.11G069600 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ceric.16G039600.1 AFB2, Ceric.16G039600 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
LOC_Os11g31620.1 AFB2, LOC_Os11g31620 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Len_g13483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_646265g0010 COI1 Coronatine-insensitive protein homolog 1a OS=Oryza... 0.02 OrthoFinder output from all 47 species
Sam_g04852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Zm00001e028730_P001 COI1, Zm00001e028730 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 69 114
IPR041567 COI1_F-box 9 49
No external refs found!