1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g10515

Len_g10515


Description : heavy chain of Dynein microtubule-based motor protein complex & original description: none


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10515

Target Alias Description ECC score Gene Family Method Actions
Aev_g04567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68709 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14210.t1 Aspi01Gene14210 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14211.t1 Aspi01Gene14211 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14213.t3 Aspi01Gene14213 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16686.t2 Aspi01Gene16686 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16687.t1 Aspi01Gene16687 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16688.t1 Aspi01Gene16688 heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16688.t2 Aspi01Gene16688 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene18118.t1 Aspi01Gene18118 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18121.t1 Aspi01Gene18121 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18127.t1 Aspi01Gene18127 heavy chain of Dynein microtubule-based motor protein... 0.04 OrthoFinder output from all 47 species
Aspi01Gene18129.t3 Aspi01Gene18129 heavy chain of Dynein microtubule-based motor protein... 0.05 OrthoFinder output from all 47 species
Aspi01Gene27862.t2 Aspi01Gene27862 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27863.t1 Aspi01Gene27863 heavy chain of Dynein microtubule-based motor protein... 0.06 OrthoFinder output from all 47 species
Aspi01Gene27866.t1 Aspi01Gene27866 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27868.t1 Aspi01Gene27868 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene27870.t1 Aspi01Gene27870 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene46598.t1 Aspi01Gene46598 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46602.t1 Aspi01Gene46602 heavy chain of Dynein microtubule-based motor protein... 0.07 OrthoFinder output from all 47 species
Aspi01Gene61604.t1 Aspi01Gene61604 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61605.t2 Aspi01Gene61605 heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61605.t3 Aspi01Gene61605 heavy chain of Dynein microtubule-based motor protein... 0.07 OrthoFinder output from all 47 species
Aspi01Gene61616.t2 Aspi01Gene61616 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69846.t1 Aspi01Gene69846 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69851.t2 Aspi01Gene69851 heavy chain of Dynein microtubule-based motor protein... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69852.t1 Aspi01Gene69852 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene69853.t1 Aspi01Gene69853 heavy chain of Dynein microtubule-based motor protein... 0.05 OrthoFinder output from all 47 species
Azfi_s0253.g060395 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Azfi_s0260.g060732 No alias heavy chain of Dynein microtubule-based motor protein... 0.04 OrthoFinder output from all 47 species
Ceric.1Z272200.1 Ceric.1Z272200 heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Dac_g12733 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Dac_g46066 No alias heavy chain of Dynein microtubule-based motor protein... 0.05 OrthoFinder output from all 47 species
Len_g59074 No alias heavy chain of Dynein microtubule-based motor protein... 0.04 OrthoFinder output from all 47 species
Msp_g26466 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002534 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026474 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sam_g02358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g33675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008569 minus-end-directed microtubule motor activity IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR041228 Dynein_C 2729 3025
IPR024317 Dynein_heavy_chain_D4_dom 1329 1585
IPR035699 AAA_6 460 789
IPR041466 Dynein_AAA5_ext 947 1082
IPR013602 Dynein_heavy_linker 3 380
IPR041658 AAA_lid_11 2575 2722
IPR004273 Dynein_heavy_D6_P-loop 2430 2543
IPR035706 AAA_9 1962 2184
IPR024743 Dynein_HC_stalk 1601 1934
IPR041589 DNAH3_AAA_lid_1 1187 1267
No external refs found!