Aliases : ATRAB1A, ATRABD2B, RAB1A
Description : D-class RAB GTPase & original description: none
Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00145590 | ATRAB1B, RABD2A,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g105164 | RAB1C, ATRAB1C, ATRABD2C | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g01035 | ATRAB1A, ATRABD2B, RAB1A | D-class RAB GTPase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g24852 | ATRAB1B, RABD2A,... | D-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09984 | ATRAB1B, RABD2A,... | D-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023798 | RAB1C, ATRAB1C, ATRABD2C | not classified & original description: CDS=1-543 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0095.g043564 | ATRAB1A, ATRABD2B, RAB1A | D-class RAB GTPase & original description: CDS=1193-1804 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.38G045700.1 | RAB1C, ATRAB1C,... | D-class RAB GTPase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001408.10 | RAB1C, ATRAB1C, ATRABD2C | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g560150 | ATRAB1A, ATRABD2B, RAB1A | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013868001 | RAB1C, ATRAB1C, ATRABD2C | Vesicle trafficking.regulation of membrane tethering and... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15477 | ATRAB1B, RABD2A,... | D-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g37800.1 | ATRAB1B, RABD2A,... | D-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014533 | RAB1C, ATRAB1C, ATRABD2C | not classified & original description: CDS=274-789 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g103370.3.1 | ATFP8, RABD1,... | D-class RAB GTPase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g053940.3.1 | ATRAB1B, RABD2A,... | D-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015303_P001 | ATRAB1B, RABD2A,... | D-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEA | Interproscan |
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0005254 | chloride channel activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006821 | chloride transport | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:1903293 | phosphatase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001806 | Small_GTPase | 10 | 170 |
| No external refs found! |
