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  5. Len_g10876

Len_g10876 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10876

Target Alias Description ECC score Gene Family Method Actions
Adi_g016287 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01246.t1 Aspi01Gene01246 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36947 OBP3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019969001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os09g29960.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Len_g14959 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03879 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc05g054510.2.1 OBP3, Solyc05g054510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g071480.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Spa_g49774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27639 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017319_P001 CDF2, Zm00001e017319 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 72 128
No external refs found!