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  5. Len_g11459

Len_g11459 (ATCYP20-2, CYP20-2)


Aliases : ATCYP20-2, CYP20-2

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11459
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00179330 ROC2,... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00225920 ATCYP20-2,... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00158000 ROC4,... Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Adi_g017075 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05955 ROC1 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13368 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G051100.1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g02039 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20933 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g15930.1 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.02 OrthoFinder output from all 47 species
Msp_g05079 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00741 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03408 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09261 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005017 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=32-877 0.03 OrthoFinder output from all 47 species
Sam_g15124 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38062 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo229229 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Zm00001e025457_P001 ROC4, Zm00001e025457 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Zm00001e029710_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 112 268
No external refs found!