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  5. Len_g11472

Len_g11472


Description : protein involved in cytochrome b6/f complex assembly *(DAC) & original description: none


Gene families : OG0007052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11472

Target Alias Description ECC score Gene Family Method Actions
AT3G17930 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Adi_g011271 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Ala_g00365 No alias protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
Aop_g21364 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Ceric.21G052900.1 Ceric.21G052900 protein involved in cytochrome b6/f complex assembly... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.18 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Cre01.g000850 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Dac_g14010 No alias protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
Dcu_g16352 No alias protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
Dde_g01199 No alias protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
LOC_Os01g59080.1 LOC_Os01g59080 DAC protein involved in cytochrome b6/f complex assembly 0.02 OrthoFinder output from all 47 species
Lfl_g03631 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Msp_g12301 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Pir_g01527 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Pp3c5_23310V3.1 Pp3c5_23310 No annotation 0.03 OrthoFinder output from all 47 species
Ppi_g00421 No alias protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
Smo406591 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Solyc05g006440.4.1 Solyc05g006440 DAC protein involved in cytochrome b6/f complex assembly 0.03 OrthoFinder output from all 47 species
Spa_g03184 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Tin_g00254 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Zm00001e019533_P001 Zm00001e019533 DAC protein involved in cytochrome b6/f complex assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR021562 DUF3007 89 184
No external refs found!