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  5. Len_g11916

Len_g11916


Description : rhamnosyltransferase *(RRT) & original description: none


Gene families : OG0001379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11916
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00119840 evm_27.TU.AmTr_v1... O-fucosyltransferase 34 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G02250 No alias O-fucosyltransferase family protein 0.03 OrthoFinder output from all 47 species
Ala_g04451 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15521 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16331 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24342 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16375 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06844 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008161001 No alias O-fucosyltransferase 34 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_12518 No alias rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
LOC_Os03g21090.1 LOC_Os03g21090 rhamnosyltransferase 0.02 OrthoFinder output from all 47 species
LOC_Os06g17390.1 LOC_Os06g17390 rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
Ore_g41169 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11742 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16164 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02274 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05889 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114730.3.1 Solyc03g114730 rhamnosyltransferase 0.02 OrthoFinder output from all 47 species
Spa_g06711 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04680 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16519 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001544_P002 Zm00001e001544 rhamnosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 120 440
No external refs found!