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  5. Len_g12160

Len_g12160 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12160
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00224800 ATPDR3, PDR3,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00122p00085720 PDR4, ATPDR4,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 OrthoFinder output from all 47 species
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.04 OrthoFinder output from all 47 species
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.04 OrthoFinder output from all 47 species
AT3G30842 ATPDR10, PDR10 pleiotropic drug resistance 10 0.03 OrthoFinder output from all 47 species
Aob_g05367 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30586 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03117 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06778 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06909 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16447 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02115.t1 ATPDR7, PDR7,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53447.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G065500.1 PDR11, ATPDR11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g05213 PDR1, ATPDR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016993001 ATPDR7, PDR7 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01016998001 PDR1, ATPDR1 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01017200001 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
GSVIVT01031314001 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01035715001 PDR4, ATPDR4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_15493 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_30095 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_34310 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_34645 PDR4, ATPDR4 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g08260.1 PDR4, ATPDR4,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g42350.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os09g16290.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10426781g0010 PDR4, ATPDR4 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_108793g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_17319g0010 PDR6, ATPDR6 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_17319g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_249533g0010 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3894g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp2g03890.1 ATPDR3, PDR3 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp2g07030.1 PDR6, ATPDR6 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp2g14210.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp4g06670.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Nbi_g04228 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11856 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41029 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41909 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c19_17390V3.1 PDR1, ATPDR1,... pleiotropic drug resistance 1 0.02 OrthoFinder output from all 47 species
Ppi_g40989 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59241 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004775 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=697-5283 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009396 PDR11, ATPDR11 subfamily ABCG transporter & original description: CDS=1-4197 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016875 ATPDR3, PDR3 subfamily ABCG transporter & original description: CDS=1-2793 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026014 ATPDR3, PDR3 subfamily ABCG transporter & original description: CDS=1-2877 0.03 OrthoFinder output from all 47 species
Sam_g07220 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g018510.3.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc05g053610.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc05g055330.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc06g065670.4.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc08g067620.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc11g067000.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g019620.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g18419 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45075 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02910 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016714_P002 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 185 397
IPR013581 PDR_assoc 402 467
IPR043926 ABCG_dom 64 117
IPR003439 ABC_transporter-like_ATP-bd 556 708
No external refs found!