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  5. Len_g12267

Len_g12267


Description : MYB-RELATED transcription factor *(MYB-R-R) & original description: none


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12267

Target Alias Description ECC score Gene Family Method Actions
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G04760 No alias Duplicated homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G58900 No alias Homeodomain-like transcriptional regulator 0.06 OrthoFinder output from all 47 species
Adi_g004593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g012577 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Adi_g021554 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Als_g39083 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aob_g16613 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aob_g22310 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aop_g13795 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Cba_g13543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ceric.14G074800.1 Ceric.14G074800 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G031800.1 Ceric.16G031800 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Ceric.30G065000.1 Ceric.30G065000 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Cre03.g198800 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dac_g03644 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08181 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014756001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Gb_28483 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os08g04840.1 LOC_Os08g04840 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Len_g13453 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
MA_11322g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_41803g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
MA_79012g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Ore_g01540 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ore_g21324 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g09334 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g22023 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Solyc03g113620.3.1 Solyc03g113620 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Solyc12g008800.3.1 Solyc12g008800 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Spa_g26734 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Spa_g37626 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Tin_g06457 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e019190_P001 Zm00001e019190 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e028729_P001 Zm00001e028729 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Zm00001e031755_P001 Zm00001e031755 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 118 163
No external refs found!