Len_g12336 (WRKY39, ATWRKY39)

Aliases : WRKY39, ATWRKY39

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g12336

Target	Alias	Description	ECC score	Gene Family Method
AT2G24570	WRKY17, ATWRKY17	WRKY DNA-binding protein 17	0.04	OrthoFinder output from all 47 species
Azfi_s0012.g012906	WRKY21	WRKY-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Mp3g00010.1	ATWRKY11, WRKY11	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Nbi_g11340	WRKY21	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g30509	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g31761	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g60473	WRKY17, ATWRKY17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g093050.3.1	ATWRKY7, WRKY7,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e012066_P002	WRKY21, Zm00001e012066	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	HCCA
CC	GO:0031262	Ndc80 complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	271	328
IPR018872	Zn-cluster-dom	225	267

External Links

No external refs found!

Len_g12336 (WRKY39, ATWRKY39)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation