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  5. Len_g12391

Len_g12391


Description : non-SNARE-type phytolongin & original description: none


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12391
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00108030 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Adi_g029112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14986 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14987 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47691.t1 Aspi01Gene47691 non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66627.t1 Aspi01Gene66627 non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29996 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G015200.1 Ceric.10G015200 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G046400.1 Ceric.37G046400 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g15032 No alias non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14095 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04173 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25388 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23619 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022381 No alias non-SNARE-type phytolongin & original description: CDS=1-828 0.03 OrthoFinder output from all 47 species
Spa_g20169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 36 98
No external refs found!