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  5. Len_g12398

Len_g12398 (HSP60, HSP60-3B)


Aliases : HSP60, HSP60-3B

Description : chaperone *(Hsp60) & original description: none


Gene families : OG0001609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12398

Target Alias Description ECC score Gene Family Method Actions
AT2G33210 HSP60-2 heat shock protein 60-2 0.04 OrthoFinder output from all 47 species
Adi_g078675 HSP60, HSP60-3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02162 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22632 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01781 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30058 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.25G075100.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g01676 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10198 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16560 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016859001 HSP60-3A External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
MA_8569886g0010 HSP60, HSP60-3B Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g11889 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01176 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00600 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06294 No alias chaperone *(Hsp60) & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g06295 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10343 No alias chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g121640.3.1 HSP60-3A, Solyc03g121640 chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Solyc09g091180.3.1 HSP60, HSP60-3B,... chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Spa_g08282 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18561 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08958 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004641_P001 HSP60, HSP60-3B,... chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 52 554
No external refs found!