Len_g12521


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12521

Target Alias Description ECC score Gene Family Method Actions
AT5G46460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g033814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17504 OTP81 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18491 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55316 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.07 OrthoFinder output from all 47 species
Azfi_s0261.g060752 CRR22 not classified & original description: CDS=1-1500 0.04 OrthoFinder output from all 47 species
Azfi_s0405.g068373 No alias not classified & original description: CDS=1-2967 0.04 OrthoFinder output from all 47 species
Azfi_s0873.g090702 No alias not classified & original description: CDS=1-2778 0.05 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76573 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G028200.1 OTP84, Ceric.02G028200 not classified & original description: pacid=50583866... 0.05 OrthoFinder output from all 47 species
Ceric.03G031800.1 Ceric.03G031800 not classified & original description: pacid=50573080... 0.04 OrthoFinder output from all 47 species
Ceric.06G079700.1 CRR22, Ceric.06G079700 not classified & original description: pacid=50619673... 0.06 OrthoFinder output from all 47 species
Ceric.07G026400.1 Ceric.07G026400 not classified & original description: pacid=50626353... 0.04 OrthoFinder output from all 47 species
Ceric.07G059900.1 Ceric.07G059900 not classified & original description: pacid=50627027... 0.05 OrthoFinder output from all 47 species
Ceric.10G077700.1 Ceric.10G077700 not classified & original description: pacid=50611965... 0.04 OrthoFinder output from all 47 species
Ceric.11G085300.1 Ceric.11G085300 not classified & original description: pacid=50596385... 0.04 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.03 OrthoFinder output from all 47 species
Ceric.14G094700.1 EMB2758, Ceric.14G094700 not classified & original description: pacid=50634278... 0.04 OrthoFinder output from all 47 species
Ceric.15G051800.1 VAC1, ECB2,... not classified & original description: pacid=50639747... 0.05 OrthoFinder output from all 47 species
Ceric.16G024400.1 Ceric.16G024400 not classified & original description: pacid=50589838... 0.04 OrthoFinder output from all 47 species
Ceric.16G081600.1 Ceric.16G081600 not classified & original description: pacid=50589725... 0.06 OrthoFinder output from all 47 species
Ceric.17G079000.1 Ceric.17G079000 not classified & original description: pacid=50617699... 0.05 OrthoFinder output from all 47 species
Ceric.20G003600.1 Ceric.20G003600 not classified & original description: pacid=50567008... 0.05 OrthoFinder output from all 47 species
Ceric.27G008800.1 VAC1, ECB2,... not classified & original description: pacid=50605786... 0.05 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.03 OrthoFinder output from all 47 species
Ceric.30G005600.1 Ceric.30G005600 not classified & original description: pacid=50608549... 0.08 OrthoFinder output from all 47 species
Ceric.31G069700.1 CRR21, Ceric.31G069700 not classified & original description: pacid=50574812... 0.05 OrthoFinder output from all 47 species
Ceric.32G042700.1 Ceric.32G042700 not classified & original description: pacid=50598057... 0.05 OrthoFinder output from all 47 species
Dac_g17043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30157 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26799 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43321 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16071 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22647 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23577 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46551 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g46792 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g50436 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
MA_10164206g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_10431508g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_104937g0010 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.05 OrthoFinder output from all 47 species
MA_122899g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_136188g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_18383g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_31170g0010 CRR22 RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
MA_36643g0010 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
MA_36655g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
MA_38266g0010 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_465411g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_525914g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_658463g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_724726g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_812716g0010 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_81514g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_935792g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.07 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g14089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38728 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46077 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06160 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17180 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24057 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04292 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13434 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13547 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65865 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56997 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011560 No alias not classified & original description: CDS=661-2424 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011578 OTP84 not classified & original description: CDS=1-2682 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013077 No alias not classified & original description: CDS=1-438 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022950 EMB2261 not classified & original description: CDS=1-2124 0.03 OrthoFinder output from all 47 species
Sam_g30162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15123 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 688 714
IPR002885 Pentatricopeptide_repeat 283 307
IPR002885 Pentatricopeptide_repeat 518 544
IPR002885 Pentatricopeptide_repeat 208 238
IPR002885 Pentatricopeptide_repeat 311 341
IPR002885 Pentatricopeptide_repeat 789 810
IPR002885 Pentatricopeptide_repeat 715 761
IPR002885 Pentatricopeptide_repeat 613 662
IPR002885 Pentatricopeptide_repeat 410 455
No external refs found!