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  5. Len_g13353

Len_g13353


Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT1G28310 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g016055 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086972 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113667 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04622 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01246.t1 Aspi01Gene01246 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26374.t1 Aspi01Gene26374 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44459.t1 Aspi01Gene44459 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.03 OrthoFinder output from all 47 species
Cba_g57567 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G032900.1 TMO6, Ceric.22G032900 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g16326 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007758001 HCA2, DOF5.6 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01011138001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
LOC_Os01g48290.1 LOC_Os01g48290 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os10g35300.2 LOC_Os10g35300 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Len_g17550 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19321 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05845 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25217 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28828 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05506 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32547 CDF3 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023228 No alias transcription factor *(DOF) & original description: CDS=1-1353 0.04 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Tin_g20763 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003086_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e004476_P002 Zm00001e004476 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005107_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 11 66
No external refs found!