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  5. Len_g13533

Len_g13533


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13533

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00030040 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g081283 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11000 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01734 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12792 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67143.t1 Aspi01Gene67143 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37370 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03800 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g14256 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031752001 No alias Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03899 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os01g04330.1 LOC_Os01g04330 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os01g72080.1 LOC_Os01g72080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g13580.1 LOC_Os05g13580 Probable calcium-binding protein CML18 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g54649 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.03 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Pir_g18745 CML41 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04471 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33634 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c9_25180V3.1 Pp3c9_25180 EF hand calcium-binding protein family 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009869 No alias calcium sensor *(CML) & original description: CDS=1-726 0.03 OrthoFinder output from all 47 species
Solyc01g005370.3.1 Solyc01g005370 Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc02g091500.1.1 Solyc02g091500 Calcium-binding protein CML24 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Spa_g09952 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09953 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24320 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28931 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45182 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e031549_P001 Zm00001e031549 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 122 182
IPR002048 EF_hand_dom 199 264
No external refs found!