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  5. Len_g13655

Len_g13655


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000191_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13655

Target Alias Description ECC score Gene Family Method Actions
AT2G39640 No alias glycosyl hydrolase family 17 protein 0.02 OrthoFinder output from all 47 species
Ala_g04103 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00746 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70528 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0152.g053403 No alias EC_3.2 glycosylase & original description: CDS=542-1822 0.03 OrthoFinder output from all 47 species
Ceric.12G017700.1 Ceric.12G017700 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g01392 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g39768 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013401001 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031959001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.03 OrthoFinder output from all 47 species
GSVIVT01037711001 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g14210.1 BG_PPAP,... Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51240.2 LOC_Os03g51240 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g07290.1 LOC_Os10g07290 Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g13578 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429401g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Nbi_g17976 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04765 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09502 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36165 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09296 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020922 No alias EC_3.2 glycosylase & original description: CDS=1-1173 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026108 No alias EC_3.2 glycosylase & original description: CDS=1-1605 0.04 OrthoFinder output from all 47 species
Sam_g18500 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo34456 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Solyc07g049370.2.1 Solyc07g049370 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g040860.2.1 Solyc12g040860 Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g11549 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25181 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54990 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 28 349
No external refs found!