Aliases : LRL3
Description : bHLH-type transcription factor & original description: none
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g13668 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00138470 | evm_27.TU.AmTr_v1... | External stimuli response.light.UV-A/blue... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00228970 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00079p00137860 | BEE3,... | External stimuli response.light.UV-A/blue... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00106p00127480 | UNE10,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G05805 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G09530 | PIF3, POC1, PAP3 | phytochrome interacting factor 3 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18400 | BEE1 | BR enhanced expression 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G20180 | PIL5, PIF1 | phytochrome interacting factor 3-like 5 | 0.05 | OrthoFinder output from all 47 species | |
| AT2G42280 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G43140 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G46970 | PIL1 | phytochrome interacting factor 3-like 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G23690 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00120 | GT140, IND1, IND, EDA33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G28790 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G28800 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G33880 | RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G34530 | CIB1 | cryptochrome-interacting basic-helix-loop-helix 1 | 0.05 | OrthoFinder output from all 47 species | |
| AT4G36540 | BEE2 | BR enhanced expression 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G61270 | PIF7 | phytochrome-interacting factor7 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058004 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075506 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g03333 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09029 | SPT | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g17433 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26607 | RSL2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06024 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19904 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33578 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g48384 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09856 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene35709.t3 | Aspi01Gene35709 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54818.t2 | RSL2, Aspi01Gene54818 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene66676.t2 | Aspi01Gene66676 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene66741.t2 | PIL5, PIF1,... | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0043.g026959 | No alias | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G026000.1 | LRL3, Ceric.09G026000 | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G063500.1 | PIF3, POC1,... | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10732 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07262 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07694 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16366 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010126001 | No alias | External stimuli response.light.UV-A/blue... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011873001 | No alias | External stimuli response.light.UV-A/blue... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013553001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018164001 | UNE10 | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01018165001 | UNE10 | RNA biosynthesis.transcriptional activation.bHLH... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01025313001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01026056001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01033350001 | No alias | External stimuli response.light.UV-A/blue... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033356001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g43680.3 | LOC_Os01g43680 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g39140.1 | LOC_Os02g39140 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g47660.1 | CIB1, LOC_Os02g47660 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g56140.1 | SPT, LOC_Os02g56140 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g04740.2 | PIF3, POC1,... | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g39630.1 | LOC_Os08g39630 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g41650.2 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22408 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g30069 | RSL2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_158362g0010 | CIB5 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_26114g0010 | SPT | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_50630g0010 | LRL3 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_83500g0010 | HEC1 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g18910.1 | HEC1 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g21470.1 | RSL2 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46877 | RSL2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48718 | LRL3 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g11326 | LRL3 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g26644 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g31298 | ATRSL1, RSL1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g34452 | RSL2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43163 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44899 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g01951 | UNE12 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17357 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g25271 | RSL2 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g26288 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g26340 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g29292 | LRL1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g50236 | PIL5, PIF1 | regulatory protein *(PIF) of red/far-red light... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c3_8460V3.1 | RSL2, Pp3c3_8460 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02784 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29684 | HEC2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63739 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0229.g026409 | No alias | bHLH-type transcription factor & original description: CDS=1-246 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15799 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36377 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo405220 | HEC1 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| Smo444782 | LRL2 | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g010130.4.1 | Solyc01g010130 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g044460.1.1 | HEC2, Solyc03g044460 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g007300.4.1 | BEE3, Solyc04g007300 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077480.3.1 | Solyc04g077480 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g078690.3.1 | SPT, Solyc04g078690 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g043580.4.1 | PIL6, PIF5,... | transcription factor (bHLH). PIF red/far-red light... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g036470.2.1 | BEE3, Solyc12g036470 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24430 | HEC1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005554_P001 | Zm00001e005554 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010060_P001 | Zm00001e010060 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010138_P002 | Zm00001e010138 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e010540_P001 | Zm00001e010540 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e011084_P002 | Zm00001e011084 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011866_P002 | UNE12, Zm00001e011866 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015045_P002 | Zm00001e015045 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e017430_P001 | PIF3, POC1,... | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032950_P002 | UNE12, Zm00001e032950 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034446_P001 | CIB5, Zm00001e034446 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036318_P001 | LRL1, Zm00001e036318 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
