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  5. Len_g13837

Len_g13837


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13837

Target Alias Description ECC score Gene Family Method Actions
Adi_g014575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45539.t1 Aspi01Gene45539 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008886 No alias not classified & original description: CDS=46-1419 0.04 OrthoFinder output from all 47 species
Ceric.12G043400.1 Ceric.12G043400 not classified & original description: pacid=50601666... 0.06 OrthoFinder output from all 47 species
Cre12.g494550 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g41681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10520g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12794 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g04571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo413714 No alias No description available 0.01 OrthoFinder output from all 47 species
Solyc02g038816.1.1 Solyc02g038816 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g05527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026627_P001 Zm00001e026627 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 133 198
IPR000504 RRM_dom 281 347
IPR000504 RRM_dom 16 80
No external refs found!