Len_g14231


Description : not classified & original description: none


Gene families : OG0000011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14231

Target Alias Description ECC score Gene Family Method Actions
Adi_g035287 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23283 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene20521.t1 Aspi01Gene20521 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25686.t1 CRK8, Aspi01Gene25686 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52006.t1 ORF120, Aspi01Gene52006 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.07G026900.1 CRK8, Ceric.07G026900 not classified & original description: pacid=50626259... 0.03 OrthoFinder output from all 47 species
Cre16.g660331 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_03442 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Ppi_g11634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g038175.1.1 ORF240B, Solyc10g038175 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 115 217
IPR025724 GAG-pre-integrase_dom 31 101
No external refs found!