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  5. Len_g14298

Len_g14298 (ATHB22, MEE68, ZHD2, HB22)


Aliases : ATHB22, MEE68, ZHD2, HB22

Description : zf-HD-type transcription factor & original description: none


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14298
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.02 OrthoFinder output from all 47 species
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.02 OrthoFinder output from all 47 species
Ala_g05598 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04773 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015987 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g07428 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15825 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G025400.1 AtHB31, ZHD4,... zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G008700.1 ATHB22, MEE68,... zf-HD-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g05660 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11956 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003614001 ATHB22, MEE68, ZHD2, HB22 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
LOC_Os02g47770.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os04g35500.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
LOC_Os09g24820.1 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os11g13930.1 AtHB31, ZHD4,... transcription factor (zf-HD) 0.05 OrthoFinder output from all 47 species
Len_g56381 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_453742g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g01020 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23519 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g35218 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00560 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g080490.4.1 AtHB31, ZHD4,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Spa_g49192 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50573 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009830_P001 HB34, ZHD9,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Zm00001e018364_P001 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Zm00001e022486_P001 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 125 177
No external refs found!