Aliases : ATL2, TL2
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00126990 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00221710 | RHA2A,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00102p00069840 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G63840 | No alias | RING/U-box superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G01150 | RHA2B | RING-H2 finger protein 2B | 0.06 | OrthoFinder output from all 47 species | |
| AT2G27940 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G42360 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G43430 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G60966 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G11360 | RHA1B | RING-H2 finger A1B | 0.03 | OrthoFinder output from all 47 species | |
| AT4G40070 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G17600 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G27420 | ATL31, CNI1 | carbon/nitrogen insensitive 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G53110 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g028522 | ATL3 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g15196 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g26548 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene51635.t1 | ATRING1, RING1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033681 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0402.g068322 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g58164 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083300.1 | Ceric.09G083300 | not classified & original description: pacid=50586861... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G001000.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G001100.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G079200.1 | Ceric.29G079200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.38G004700.1 | Ceric.38G004700 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.39G005300.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000204.87 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g05542 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g39871 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07519 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01188 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07621 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06688 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10960 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g30250 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015682001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018343001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026978001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g11460.1 | ATL43, LOC_Os01g11460 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g61470.1 | LOC_Os01g61470 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g15060.1 | LOC_Os02g15060 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g45710.1 | BRH1, LOC_Os02g45710 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g45780.1 | LOC_Os02g45780 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g22110.1 | ATL5, LOC_Os03g22110 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g30020.1 | LOC_Os03g30020 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g36310.1 | LOC_Os05g36310 | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g34530.1 | ATL43, LOC_Os06g34530 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g34880.1 | ATL43, LOC_Os06g34880 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g37760.1 | ATL6, LOC_Os08g37760 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g29310.1 | ATL6, LOC_Os09g29310 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g47690.1 | LOC_Os11g47690 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g24490.1 | LOC_Os12g24490 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434759g0010 | BRH1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_105610g0010 | RHA3A | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_552961g0010 | No alias | RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_7553g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g19130.1 | ATL1F | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38764 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g12325 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04496 | DEP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32586 | DEP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43979 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g55439 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g03091 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05782 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g46048 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0060.g015199 | ATL43 | not classified & original description: CDS=1-1395 | 0.04 | OrthoFinder output from all 47 species | |
| Smo438800 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Smo87949 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g02204 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17343 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g37346 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003264_P001 | Zm00001e003264 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014286_P001 | Zm00001e014286 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014302_P001 | Zm00001e014302 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015445_P001 | BRH1, Zm00001e015445 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016470_P001 | Zm00001e016470 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022781_P001 | Zm00001e022781 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039314_P001 | Zm00001e039314 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016597 | amino acid binding | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0043177 | organic acid binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 125 | 168 |
| No external refs found! |
