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  5. Len_g15010

Len_g15010


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00035550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
Ala_g22689 No alias TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g03271 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09029 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43392.t1 Aspi01Gene43392 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02339 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34229 AtTCP14, TCP14 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.02 OrthoFinder output from all 47 species
LOC_Os08g43160.1 LOC_Os08g43160 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_16752g0010 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_635g0010 AtTCP14, TCP14 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Pnu_g02433 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g070900.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc11g020670.1.1 Solyc11g020670 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e023897_P001 Zm00001e023897 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 151 329
No external refs found!