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  5. Len_g15213

Len_g15213 (WIN1, SHN1)


Aliases : WIN1, SHN1

Description : subgroup ERF-V transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15213

Target Alias Description ECC score Gene Family Method Actions
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G78080 RAP2.4 related to AP2 4 0.05 OrthoFinder output from all 47 species
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.04 OrthoFinder output from all 47 species
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.02 OrthoFinder output from all 47 species
Adi_g082591 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06485 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g07933 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Als_g08964 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37045 No alias cutin and suberin biosynthesis transcription factor... 0.04 OrthoFinder output from all 47 species
Aob_g03996 HRD subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g36093 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g30341 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33217 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene02047.t1 ATERF-9, ERF9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17041.t1 Aspi01Gene17041 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18475.t1 Aspi01Gene18475 subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21082.t1 Aspi01Gene21082 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21086.t1 Aspi01Gene21086 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25515.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43206.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene49723.t1 HRE2, Aspi01Gene49723 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63655.t1 HRE2, Aspi01Gene63655 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69856.t1 Aspi01Gene69856 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013216 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0070.g036708 No alias not classified & original description: CDS=1-939 0.04 OrthoFinder output from all 47 species
Cba_g24352 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Cba_g69639 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.01G083900.1 RAP2.2, Ceric.01G083900 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.06G023400.1 Ceric.06G023400 subgroup ERF-I transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G036000.1 ATERF8, ATERF-8,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.24G042900.1 DEAR2, Ceric.24G042900 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Ceric.24G043100.1 DEAR4, RAP2.10,... not classified & original description: pacid=50629256... 0.04 OrthoFinder output from all 47 species
Ceric.29G030500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.38G045600.1 Ceric.38G045600 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g14879 ERF110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19756 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g20126 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01023 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11898 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g12089 RAP2.12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15810 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18185 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010631001 DREB1B, ATCBF1, CBF1 Dehydration-responsive element-binding protein 1D... 0.03 OrthoFinder output from all 47 species
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01019860001 ddf2 External stimuli response.temperature.ICE-CBF cold... 0.04 OrthoFinder output from all 47 species
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 OrthoFinder output from all 47 species
Gb_26067 ATERF3, ERF3 transcription factor (ERF) 0.07 OrthoFinder output from all 47 species
Gb_29263 DREB26 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_36622 DREB26 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g58420.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08500.2 RAP2.2, LOC_Os03g08500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g46440.1 ERF38, ATERF38,... transcription factor (DREB) 0.07 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os04g55520.1 DEAR3, LOC_Os04g55520 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os06g03670.1 DREB1A, ATCBF3,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09810.1 LOC_Os06g09810 Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
LOC_Os08g31580.1 RAP2.4, LOC_Os08g31580 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g20350.1 RAP2.4, LOC_Os09g20350 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Len_g09985 CRF3 subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15998 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01837 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04609 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34326 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38154 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431706g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19420g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_203191g0010 ATERF3, ERF3 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_9588449g0010 ERF1, ATERF1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g22160.1 ERF110 Ethylene-responsive transcription factor ERF112... 0.02 OrthoFinder output from all 47 species
Msp_g08810 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01764 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04002 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04123 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g21637 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26195 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ore_g03524 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15421 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g20460 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g28637 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g29062 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g29063 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g29205 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32583 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g34717 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44016 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g10313 No alias subgroup ERF-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40777 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46475 RRTF1 subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58283 ERF110 subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17467 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20605 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g05046 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g17524 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22071 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008166 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024985 CRF3 subgroup ERF-VI transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sam_g06091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 OrthoFinder output from all 47 species
Solyc11g042560.1.1 Solyc11g042560 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g17336 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g24188 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39600 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46619 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g49731 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g00486 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007205_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1E... 0.02 OrthoFinder output from all 47 species
Zm00001e007352_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Zm00001e019567_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e021579_P001 ERF7, ATERF7,... Pathogenesis-related genes transcriptional activator... 0.02 OrthoFinder output from all 47 species
Zm00001e023870_P001 RAP2.4, Zm00001e023870 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e028920_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e029765_P001 Zm00001e029765 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e032033_P001 ATERF-9, ERF9,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e038525_P001 DREB26, Zm00001e038525 Ethylene-responsive transcription factor ERF013... 0.03 OrthoFinder output from all 47 species
Zm00001e041532_P001 Zm00001e041532 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e041620_P002 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 49 97
No external refs found!