Aliases : NCED3, SIS7, STO1, ATNCED3
Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & original description: none
Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g15334 | |
| Cluster | HCCA: Cluster_125 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene10157.t1 | CCD4, NCED4,... | EC_1.13 oxidoreductase acting on single donor with... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene40854.t1 | ATCCD1, CCD1,... | EC_1.13 oxidoreductase acting on single donor with... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G042200.1 | CCD4, NCED4,... | EC_1.13 oxidoreductase acting on single donor with... | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g07800.1 | NCED3, SIS7,... | carotenoid cleavage dioxygenase (CCD4). neoxanthin... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24451 | ATNCED5, NCED5 | EC_1.13 oxidoreductase acting on single donor with... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g075480.4.1 | CCD4, NCED4,... | carotenoid cleavage dioxygenase (CCD4) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000347 | THO complex | IEP | HCCA |
| CC | GO:0000445 | THO complex part of transcription export complex | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004294 | Carotenoid_Oase | 135 | 644 |
| No external refs found! |
