Len_g15513 (PAB2, PABP2, ATPAB2)

Aliases : PAB2, PABP2, ATPAB2

Description : mRNA poly-A-tail binding factor *(PABP) & original description: none

Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g15513

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00021244.19	PAB2, PABP2, ATPAB2	Protein biosynthesis.translation initiation.mRNA...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021244.20	PAB8, PABP8	Protein biosynthesis.translation initiation.mRNA...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002004	PABP_HYD	545	609
IPR000504	RRM_dom	110	177
IPR000504	RRM_dom	201	269
IPR000504	RRM_dom	304	372
IPR000504	RRM_dom	22	91

External Links

No external refs found!